Some Notes - 25


Topics


AI Center - a cool community





SIGGRAPH




Year Title Summary
2000 A Three-Dimensional Computer Model of the Human Heart for Studying Cardiac Fluid Dynamics (SIGGRAPH) Pioneering work by McQueen & Peskin using the Immersed Boundary Method to model full heart fluid dynamics; foundational for future fluid–structure interaction studies.
2015 Immersed boundary-finite element model of fluid-structure interaction in the aortic root (Griffith et al.) Combines IB method with finite-element hyperelastic modeling of the aortic root and valve; reproduces realistic cardiac output and valve mechanics.
2017 Image-based immersed boundary model of the aortic root (Hasan et al.) Constructs anatomically realistic aortic root and ascending aorta from CT data, with fiber-reinforced leaflet mechanics; analyzes differences in valve material properties.
2019 Modeling the Mitral Valve (Kaiser, McQueen, Peskin) Focuses on mitral valve modeling with design-based methodology and IB method; incorporates anatomy-informed fiber topology and realistic closure under physiological pressures.
2023 Comparison of Immersed Boundary Simulations of Heart Valve Hemodynamics against In Vitro 4D Flow MRI Data (Kaiser et al.) Validates IB simulations against in vitro 4D flow MRI of a pulmonary valve; shows strong qualitative and quantitative agreement.





4d Medical Modeling


Emulate, Inc. - Organs‑on‑Chips

  • Simulates the functions of various human organs for drug development and toxicology testing
  • Collaborates with Cedars-Sinai Medical Center to advance precision medicine applications and conducts joint research with the US FDA to enable its “Human Emulation System” for regulatory evaluation


BiomimX - Beating Organs‑on‑Chip

  • heart, liver, muscle models
  • “uBeat™” platform for simulating cardiovascular and muscle tissue


Mimetas - Complex tissues, in a relevant in vitro microenvironment

  • Development of the OrganoPlate (microfluidic multi-well chip) for high-throughput screening, supporting multiple tissue/disease models
  • Collaboration with pharmaceutical giants (Roche, Pfizer, etc.) for the application of 3D organ models in drug testing


Organovo Holdings, Inc.

  • Pioneering 3D Human Tissues for Drug Discovery


Company Core Technology Applications Academic & Industrial Impact Clinical / Transplant Potential
Emulate, Inc. (US) Organs-on-Chips simulating human organ functions Drug discovery, toxicology, precision medicine Partnered with Cedars-Sinai, joint studies with FDA; widely recognized leader in Organs-on-Chips Low – mainly preclinical / regulatory evaluation
BiomimX (Italy) Beating Organs-on-Chip with integrated mechanical stimulation (heart, liver, muscle) Cardiovascular research, drug safety testing “uBeat™” platform uniquely mimics beating environments; collaborations with pharma companies Medium – strong physiological fidelity, but still preclinical
Mimetas (Netherlands) OrganoPlate microfluidic chip enabling parallel multi-organ models High-throughput drug screening, disease models Collaborations with Roche, Pfizer; top European Organs-on-Chip platform Low – focused on drug testing, not transplantation
Organovo (US) 3D bioprinting of human tissues Disease modeling, drug discovery, regenerative medicine Pioneer in 3D bioprinting; active in academia and industry collaborations High – printed tissues show potential for future transplantation
Fujifilm Cellular Dynamics (CDI, US) iPSC-derived large-scale cardiomyocytes and other organ cells Drug screening, safety testing, disease modeling, regenerative medicine Supplies high-quality human cells for pharma and academia; key provider in heart research High – direct applications in regenerative medicine and potential transplantation





Some start-ups


Humimic Biosystems - Organ on Chip, 2023


DASI Simulations - AI-powered cardiac simulations, GIT, 2019


Novoheart - Heart Disease Modeling & Drug Discovery/Screening, 2014


Living Heart Project - The Living Heart Project, 2014









Katie


Pixel 10 - 2025


Crossbow Therapeutics, Inc - 2021, A


Modeling





Some Other Topics


System / Device Approx. FLOPS (Floating Point Ops per Second) Notes
Human (mental arithmetic) ~1 FLOP/s Roughly one basic operation per second when doing math by hand.
iPhone 15 (A17 Pro GPU) ~3.6 × 10¹² FLOPS (3.6 TFLOPS) Smartphone-level GPU performance.
NVIDIA RTX 4090 ~8.2 × 10¹³ FLOPS (82 TFLOPS) High-end consumer GPU (2022).
NVIDIA RTX 5090 (est.) ~1.3–1.5 × 10¹⁴ FLOPS (130–150 TFLOPS) Next-gen GPU (expected 2024–2025).
Fugaku Supercomputer ~4.4 × 10¹⁷ FLOPS (442 PFLOPS) Japan’s flagship supercomputer.
Human Brain (estimate) ~1 × 10¹⁵ – 1 × 10¹⁷ FLOPS Equivalent estimate based on ~10¹⁴–10¹⁵ synapses firing at ~10–100 Hz.


Project 1 Visualization












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